PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_6BL_B92FA1D38.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 58aa    MW: 6665.66 Da    PI: 9.0393
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_6BL_B92FA1D38.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.39.8e-31158157
                           ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--S CS
                   WRKY  1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHn 57
                           ++Dg++WrKYGqK+ kg+++pr+YYrCt a  Cpv+k+v+r++ed +++++tYeg+Hn
  Traes_6BL_B92FA1D38.1  1 MNDGCQWRKYGQKVAKGNPCPRAYYRCTVApACPVRKQVQRCQEDMSILITTYEGTHN 58
                           58***************************99**************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182906.54E-26158IPR003657WRKY domain
SMARTSM007747.1E-31158IPR003657WRKY domain
PROSITE profilePS5081126.268158IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.3E-29258IPR003657WRKY domain
PfamPF031061.9E-27258IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 58 aa     Download sequence    Send to blast
MNDGCQWRKY GQKVAKGNPC PRAYYRCTVA PACPVRKQVQ RCQEDMSILI TTYEGTHN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-221581470WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3632473e-85AK363247.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2013L09.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009591124.14e-37PREDICTED: probable WRKY transcription factor 9
RefseqXP_009800949.15e-37PREDICTED: probable WRKY transcription factor 9
RefseqXP_016484769.15e-37PREDICTED: probable WRKY transcription factor 9
SwissprotQ9C9F04e-37WRKY9_ARATH; Probable WRKY transcription factor 9
SwissprotQ8VWV62e-36WRK61_ARATH; Probable WRKY transcription factor 61
SwissprotQ9LXG83e-36WRK72_ARATH; Probable WRKY transcription factor 72
TrEMBLM7YTI35e-38M7YTI3_TRIUA; Putative WRKY transcription factor 9
STRINGMLOC_71463.22e-36(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP80223446
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.12e-38WRKY DNA-binding protein 9